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References citing polymerases and PCR kits:
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Shagin DA, Turchaninova MA, Shagina IA, Shugay M, Zaretsky AR, Zueva OI, Bolotin DA, Lukyanov S, Chudakov DM.
Application of nonsense-mediated primer exclusion (NOPE) for preparation of unique molecular barcoded libraries.
BMC Genomics. 2017 Jun 5;18(1):440 doi: 10.1186/s12864-017-3815-2
pmid: 28583065
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Shagin DA, Shagina IA, Zaretsky AR, Barsova EV, Kelmanson IV, Lukyanov S, Chudakov DM, Shugay M.
A high-throughput assay for quantitative measurement of PCR errors.
Sci Rep. 2017 Jun 2;7(1):2718 doi: 10.1038/s41598-017-02727-8
pmid: 28578414
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Kammonen JI, Smolander OP, Sipilä T, Overmyer K, Auvinen P, Paulin L.
Increased transcriptome sequencing efficiency with modified Mint-2 digestion-ligation protocol.
Anal Biochem. 2015 May 15;477:38-40 doi: 10.1016/j.ab.2014.12.001
pmid: 25513723
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Durymanov MO, Slastnikova TA, Kuzmich AI, Khramtsov YV, Ulasov AV, Rosenkranz AA, Egorov SY, Sverdlov ED, Sobolev AS.
Microdistribution of MC1R-targeted polyplexes in murine melanoma tumor tissue.
Biomaterials. 2013 Dec;34(38):10209-16 doi: 10.1016/j.biomaterials.2013.08.076
pmid: 24075405
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Suntsova M, Gogvadze EV, Salozhin S, Gaifullin N, Eroshkin F, Dmitriev SE, Martynova N, Kulikov K, Malakhova G, Tukhbatova G, Bolshakov AP, Ghilarov D, Garazha A, Aliper A, Cantor CR, Solokhin Y, Roumiantsev S, Balaban P, Zhavoronkov A, Buzdin A.
Human-specific endogenous retroviral insert serves as an enhancer for the schizophrenia-linked gene PRODH.
Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):19472-7 doi: 10.1073/pnas.1318172110
pmid: 24218577
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Pogorelko G, Lionetti V, Fursova O, Sundaram RM, Qi M, Whitham SA, Bogdanove AJ, Bellincampi D, Zabotina OA.
Arabidopsis and Brachypodium distachyon transgenic plants expressing Aspergillus nidulans acetylesterases have decreased degree of polysaccharide acetylation and increased resistance to pathogens.
Plant Physiol. 2013 May;162(1):9-23 doi: 10.1104/pp.113.214460
pmid: 23463782
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Garbuz DG, Yushenova IA, Zatsepina OG, Przhiboro AA, Bettencourt BR, Evgen'ev MB.
Organization and evolution of hsp70 clusters strikingly differ in two species of Stratiomyidae (Diptera) inhabiting thermally contrasting environments.
BMC Evol Biol. 2011 Mar 22;11:74 doi: 10.1186/1471-2148-11-74
pmid: 21426536
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Garbuz DG, Astakhova LN, Zatsepina OG, Arkhipova IR, Nudler E, Evgen'ev MB.
Functional organization of hsp70 cluster in camel (Camelus dromedarius) and other mammals.
PLoS One. 2011;6(11):e27205 doi: 10.1371/journal.pone.0027205
pmid: 22096537
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Babik W, Stuglik M, Qi W, Kuenzli M, Kuduk K, Koteja P, Radwan J.
Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate.
BMC Genomics. 2010 Jun 21;11:390 doi: 10.1186/1471-2164-11-390
pmid: 20565972
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Shagina I, Bogdanova E, Mamedov IZ, Lebedev Y, Lukyanov S, Shagin D.
Normalization of genomic DNA using duplex-specific nuclease.
Biotechniques. 2010 Jun;48(6):455-9 doi: 10.2144/000113422
pmid: 20569220
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Bogdanova EA, Shagina I, Barsova EV, Kelmanson I, Shagin DA, Lukyanov SA.
Normalizing cDNA libraries.
Curr Protoc Mol Biol. 2010 Apr;Chapter 5:Unit 5.12.1-27 doi: 10.1002/0471142727.mb0512s90
pmid: 20373503
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Chkalina AV, Zviagin IV, Mamedov IZ, Britanova OV, Staroverov DB, Lebedev IuB.
The oligoclonal expansion of T cells: study of its stability over time.
Bioorg Khim. 2010 Mar-Apr;36(2):206-14 http://www.springerlink.com
pmid: 20531479
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Buggs RJ, Chamala S, Wu W, Gao L, May GD, Schnable PS, Soltis DE, Soltis PS, Barbazuk WB.
Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping.
Mol Ecol. 2010 Mar;19 Suppl 1:132-46 doi: 10.1111/j.1365-294X.2009.04469.x
pmid: 20331776
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Sadd BM, Kube M, Klages S, Reinhardt R, Schmid-Hempel P.
Analysis of a normalised expressed sequence tag (EST) library from a key pollinator, the bumblebee Bombus terrestris.
BMC Genomics. 2010 Feb 15;11:110 doi: 10.1186/1471-2164-11-110
pmid: 20156341
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Vogel H, Heidel AJ, Heckel DG, Groot AT.
Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens.
BMC Genomics. 2010 Jan 14;11:29 doi: 10.1186/1471-2164-11-29
pmid: 20074338
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Mamedov IZ, Britanova OV, Chkalina AV, Staroverov DB, Amosova AL, Mishin AS, Kurnikova MA, Zvyagin IV, Mutovina ZY, Gordeev AV, Khaidukov SV, Sharonov GV, Shagin DA, Chudakov DM, Lebedev YB.
Individual characterization of stably expanded T cell clones in ankylosing spondylitis patients.
Autoimmunity. 2009 Sep;42(6):525-36 doi: 10.1080/08916930902960362
pmid: 19657773
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Naesby M, Nielsen SV, Nielsen CA, Green T, Tange TO, Simon E, Knechtle P, Hansson A, Schwab MS, Titiz O, Folly C, Archila RE, Maver M, van Sint Fiet S, Boussemghoune T, Janes M, Kumar AS, Sonkar SP, Mitra PP, Benjamin VA, Korrapati N, Suman I, Hansen EH, Thybo T, Goldsmith N, Sorensen AS.
Yeast artificial chromosomes employed for random assembly of biosynthetic pathways and production of diverse compounds in Saccharomyces cerevisiae.
Microb Cell Fact. 2009 Aug 13;8:45 doi: 10.1186/1475-2859-8-45
pmid: 19678954
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Gao Q, Nie P, Thompson KD, Adams A, Wang T, Secombes CJ, Zou J.
The search for the IFN-gamma receptor in fish: Functional and expression analysis of putative binding and signalling chains in rainbow trout Oncorhynchus mykiss.
Dev Comp Immunol. 2009 Aug;33(8):920-31 doi: 10.1016/j.dci.2009.03.001
pmid: 19454334
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Bogdanova EA, Shagina IA, Mudrik E, Ivanov I, Amon P, Vagner LL, Lukyanov SA, Shagin DA.
DSN depletion is a simple method to remove selected transcripts from cDNA populations.
Mol Biotechnol. 2009 Mar;41((3)):247-53 doi: 10.1007/s12033-008-9131-y
pmid: 19127453
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Beliakov IS, Karakasheva TA, Mazurenko NN.
Exon-intron structure of the LY6G6D gene.
Mol Biol (Mosk). 2009;43(4):590-8 http://www.springerlink.com
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SK Pierce, NE Curtis, JA Schwartz.
Chlorophyll a synthesis by an animal using transferred algal nuclear genes.
Symbiosis. 2009;49(3):121-31 http://www.springerlink.com
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Baranova LA, Emel'ianova VP, Zhornik EV, Minov AM, Naumenko LV, Volotovskii ID.
Cloning and analysis of coding cDNA sequence of human lymphocyte Csk tyrosine kinase under normal conditions and in choroidal melanoma.
Izv Akad Nauk Ser Biol. 2008 Nov-Dec;(6):663-70 http://www.springerlink.com
pmid: 19198071
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Garbuz DG, Zatsepina OG, Przhiboro AA, Yushenova I, Guzhova IV, Evgen'ev MB.
Larvae of related Diptera species from thermally contrasting habitats exhibit continuous up-regulation of heat shock proteins and high thermotolerance.
Mol Ecol. 2008 Nov;17(21):4763-77 doi: 10.1111/j.1365-294X.2008.03947.x
pmid: 19140990
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Pogorelko G, Fursova O, Klimov E.
Identification and Analysis of the Arabidopsis thaliana Atfas4 Gene Whose Overexpression Results in the Development of A Fasciated Stem.
J Proteomics Bioinform. 2008 Oct;1(7):329-335
pmid: 19295920
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Kondrat'eva TF, Danilevich VN, Karavaiko GI.
The primary structure and characteristics of the ISAfe600, an insertion sequence from Acidithiobacillus ferrooxidans strains.
Mikrobiologiia. 2008 Jul-Aug;77(4):524-32 http://www.springerlink.com
pmid: 18825980
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Logacheva MD, Samigullin TH, Dhingra A, Penin AA.
Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale -a wild ancestor of cultivated buckwheat.
BMC Plant Biol. 2008 May 20;8:59 doi: 10.1186/1471-2229-8-59
pmid: 18492277
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Chernov I, Stukacheva E, Akopov S, Didych D, Nikolaev L, Sverdlov E.
A new technique for selective identification and mapping of enhancers within long genomic sequences.
Biotechniques. 2008 May;44(6):775-84 doi: 10.2144/000112732
pmid: 18476831
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Chini V, Cattaneo AG, Rossi F, Bernardini G, Terova G, Saroglia M, Gornati R.
Genes expressed in Blue Fin Tuna (Thunnus thynnus) liver and gonads.
Gene. 2008 Feb 29;410(1):207-13 doi: 10.1016/j.gene.2007.12.012
pmid: 18234455
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Cechova J, Baranek M, Pidra M.
Optimization of the Preparation of ds cDNA from Flower Buds of Apricot for the cDNA-AFLP Analysis.
I International Symposium on Biotechnology of Fruit Species: BIOTECHFRUIT2008. 2008; http://www.actahort.org/books
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Tettelin H, Radune D, Kasif S, Khouri H, Salzberg SL.
Optimized multiplex PCR: efficiently closing a whole-genome shotgun sequencing project.
Genomics. 1999 Dec 15;62(3):500-7
pmid: 10644449
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