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RESEARCH PRODUCTS/Basic fluorescent proteins:

    PhiYFP

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References citing PhiYFP or TurboYFP:
  • Pletneva NV, Pletnev VZ, Souslova E, Chudakov DM, Lukyanov S, Martynov VI, Arhipova S, Artemyev I, Wlodawer A, Dauter Z, Pletnev S.
    Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.
    Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):1005-12 doi: 10.1107/S0907444913004034
    pmid: 23695245
     
  • Bonekamp NA, Islinger M, Lázaro MG, Schrader M.
    Cytochemical detection of peroxisomes and mitochondria.
    Methods Mol Biol. 2013;931:467-82 doi: 10.1007/978-1-62703-056-4_24
    pmid: 23027018
  1. Protocols for dual peroxisomes and mitochondria staining.
  • Zakharova MY, Kuznetsov NA, Dubiley SA, Kozyr AV, Fedorova OS, Chudakov DM, Knorre DG, Shemyakin IG, Gabibov AG, Kolesnikov AV.
    Substrate recognition of anthrax lethal factor examined by combinatorial and pre-steady-state kinetic approaches.
    J Biol Chem. 2009 Jul 3;284(27):17902-13 doi: 10.1074/jbc.M807510200
    pmid: 19359249
  1. Constructs used: pQE30-based bacterial expression vector encoding PS-CFP2 fused with TurboYFP.
  2. Expression system: recombinant protein FRET substrate (PS-CFP2 fused with TurboYFP) purified from E. coli strain.
  3. Detection system: Applied Photophysics SX.18MV stopped-flow spectrofluorimeter, protein FRET substrate excited at 405nm and emission detected at 530 nm.
  • Anderson DD, Stover PJ.
    SHMT1 and SHMT2 are functionally redundant in nuclear De novo thymidylate biosynthesis.
    PLoS One. 2009 Jun 9;4(6):e5839 doi: 10.1371/journal.pone.0005839
    pmid: 19513116
     
  • Suto K, Masuda H, Takenaka Y, Tsuji FI, Mizuno H.
    Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei.
    Genes Cells. 2009 Jun;14(6):727-37 doi: 10.1111/j.1365-2443.2009.01305.x
    pmid: 19469881
     
  • Sugino H, Ozaki K, Shirasaki Y, Arakawa T, Shoji S, Funatsu T.
    On-chip microfluidic sorting with fluorescence spectrum detection and multiway separation.
    Lab Chip. 2009 May 7;9(9):1254-60 doi: 10.1039/b815765k
    pmid: 19370245
     
  • Nowotschin S, Eakin GS, Hadjantonakis AK.
    Live-imaging fluorescent proteins in mouse embryos: multi-dimensional, multi-spectral perspectives.
    Trends Biotechnol. 2009 May;27(5):266-76 doi: 10.1016/j.tibtech.2009.02.006
    pmid: 19339068
     
  • Belogurov AA Jr, Kurkova IN, Friboulet A, Thomas D, Misikov VK, Zakharova MY, Suchkov SV, Kotov SV, Alehin AI, Avalle B, Souslova EA, Morse HC 3rd, Gabibov AG, Ponomarenko NA.
    Recognition and degradation of myelin basic protein peptides by serum autoantibodies: novel biomarker for multiple sclerosis.
    J Immunol. 2008 Jan 15;180(2):1258-67
    pmid: 18178866
  1. Constructs used: pQE30-based bacterial expression vector encoding PS-CFP2 fused with TurboYFP.
  2. Expression system: recombinant EPeFRET protein (PS-CFP2 fused with TurboYFP) purified from BL21 E. coli strain was used for analysis of enzyme and abzyme-mediated cleavage of encephalitogenic peptide by FRET technique.
  3. Detection system: Genius microplate reader (Tecan) with a 405-nm excitation filter and a 535-nm emission filter.
  • Condon KC, Condon GC, Dafa'alla TH, Forrester OT, Phillips CE, Scaife S, Alphey L.
    Germ-line transformation of the Mexican fruit fly.
    Insect Mol Biol. 2007 Oct;16(5):573-80
    pmid: 17894556
     
  • Mocz G.
    Fluorescent proteins and their use in marine biosciences, biotechnology, and proteomics.
    Mar Biotechnol (NY). 2007 May-Jun;9(3):305-28
    pmid: 17372780
     
  • G. McNamara and C.A. Boswell.
    A Thousand Proteins of Light: 15 Years of Advances in Fluorescent Proteins.
    In: Modern Research and Educational Topics in Microscopy. Microscopy book series (A. Mendez-Vilas, J. Diaz eds) ISBN-13: 978-84-611-9419-3. 2007;287-96 www.formatex.org/microscopy/
     
  • Serganova I , Moroz E, Moroz M, Pillarsetty N, Blasberg R
    Non-invasive molecular imaging and reporter genes.
    Central European Journal of Biology. 2006 1;1:88-123 http://www.springer.com/
     
  • Souslova EA, Chudakov DM.
    Photoswitchable cyan fluorescent protein as a FRET donor.
    Microsc Res Tech. 2006 Mar;69(3):207-9
    pmid: 16538627
     
  • Chudakov DM, Lukyanov S, Lukyanov KA.
    Fluorescent proteins as a toolkit for in vivo imaging.
    Trends Biotechnol. 2005 Dec;23(12):605-13
    pmid: 16269193
     
  • Zhu JX, Goldoni S, Bix G, Owens RT, McQuillan DJ, Reed CC, Iozzo RV.
    Decorin evokes protracted internalization and degradation of the epidermal growth factor receptor via caveolar endocytosis.
    J Biol Chem. 2005 Sep 16;280(37):32468-79
    pmid: 15994311
     
  • Yanushevich YG, Shagin DA, Fradkov AF, Shakhbazov KS, Barsova EV, Gurskaya NG, Labas YA, Matz MV, Lukyanov KA, Lukyanov SA.
    Spectral diversity among the members of the family of Green Fluorescent Protein in hydroid jellyfish (Cnidaria, Hydrozoa).
    Bioorg Khim. 2005 Jan-Feb;31(1):49-53 http://www.springerlink.com
    pmid: 15787213
     
  • Comley J.
    HIGH CONTENT SCREENING emerging importance of novel reagents/probes and pathway analysis.
    Drug Discovery World Summer. 2005;31-53 http://clients.parabolasoft.co.uk
     
  • Shagin DA, Barsova EV, Yanushevich YG, Fradkov AF, Lukyanov KA, Labas YA, Semenova TN, Ugalde JA, Meyers A, Nunez JM, Widder EA, Lukyanov SA, Matz MV.
    GFP-like proteins as ubiquitous metazoan superfamily: evolution of functional features and structural complexity.
    Mol Biol Evol. 2004 May;21(5):841-50
    pmid: 14963095
     
  • Hawley TS, Herbert DJ, Eaker SS, Hawley RG.
    Multiparameter flow cytometry of fluorescent protein reporters.
    Methods Mol Biol. 2004;263:219-38
    pmid: 14976369
     

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