pTagYFP-tubulin vector

cat.# FP135

The vector sequence has been compiled using the information from sequence databases, published literature, and other sources, together with partial sequences obtained by Evrogen. This vector has not been completely sequenced.

Download vector information: Data sheet (pdf) Sequence (txt) Restriction map (pdf) Restriction table (pdf)

Product Cat.# Size Price pTagYFP-tubulin FP135 20 μg € 400 / 200* *50% discount on the second and subsequent vectors encoding same fluorescent protein or sensor ordered by the same customer. The price does not include delivery. The price varies in different countries. Please contact your local distributor for exact prices and delivery information. Vector type mammalian expression vector Reporter TagYFP Reporter codon usage mammalian Promoter for TagYFP PCMV IE Host cells mammalian Selection prokaryotic – kanamycin eukaryotic – neomycin (G418) Replication prokaryotic – pUC ori eukaryotic – SV40 ori Use yellow fluorescent labeling of α-tubulin filaments

Vector description

pTagYFP-tubulin is a mammalian expression vector encoding TagYFP-tubulin fusion protein (see reporter description). The vector can be used for fluorescent labeling of α-tubulin in living cells.

Stably transfected MDCK canine kidney epithelial cells expressing TagYFP-tagged α-tubulin. Image was kindly provided by Dr. Christian Petzelt (Marinpharm).

TagYFP codon usage is optimized for high expression in mammalian cells (humanized) [Haas et al., 1996]. Human α-tubulin is fused to the TagYFP C-terminus. To increase mRNA translation efficiency, Kozak consensus translation initiation site is generated upstream of the TagYFP-tubulin coding sequence [Kozak, 1987].

pTagYFP-tubulin vector can be used as a source of TagYFP-tubulin hybrid sequence. The vector backbone contains unique restriction sites that permit its excision and further insertion into expression vector of choice.

The vector backbone contains immediate early promoter of cytomegalovirus (P_{CMV IE}) for protein expression, SV40 origin for replication in mammalian cells expressing SV40 T-antigen, pUC origin of replication for propagation in E. coli, and f1 origin for single-stranded DNA production. SV40 polyadenylation signals (SV40 poly A) direct proper processing of the 3'-end of the reporter mRNA.

SV40 early promoter (P_SV40) provides neomycin resistance gene (Neo^r) expression to select stably transfected eukaryotic cells using G418. Bacterial promoter (P) provides kanamycin resistance gene expression (Kan^r) in E. coli. Kan^r/Neo^r gene is linked with herpes simplex virus (HSV) thymidine kinase (TK) polyadenylation signals.

Expression in mammalian cells

pTagYFP-tubulin vector can be transfected into mammalian cells by any known transfection method. CMV promoter provides strong, constitutive expression of the TagYFP-tubulin fusion in eukaryotic cells. If required, stable transformants can be selected using G418 [Gorman, 1985].

Propagation in E. coli

Suitable host strains for propagation in E. coli include DH5alpha, HB101, XL1-Blue, and other general purpose strains. Plasmid incompatibility group is pMB1/ColE1. The vector confers resistance to kanamycin (30 μg/ml) to E. coli hosts. Copy number in E. coli is about 500.

Location of features

P_{CMV IE}: 1-589
Enhancer region: 59-465
TATA box: 554-560
Transcription start point: 583
TagYFP
Kozak consensus translation initiation site: 606-616
Start codon (ATG): 613-615
Stop codon: 2701-2703
Last amino acid in TagYFP: 1327-1329
Tubulin: 1348-2703
SV40 early mRNA polyadenylation signal
Polyadenylation signals: 2864-2869 & 2893-2898
mRNA 3' ends: 2902 & 2914
f1 single-strand DNA origin: 2961-3416
Bacterial promoter for expression of Kan^r gene
-35 region: 3478-3483
-10 region: 3501-3506
Transcription start point: 3513
SV40 origin of replication: 3757-3892
SV40 early promoter
Enhancer (72-bp tandem repeats): 3590-3661 & 3662-3733
21-bp repeats: 3737-3757, 3758-3778 & 3780-3800
Early promoter element: 3813-3819
Major transcription start points: 3809, 3847, 3853 & 3858
Kanamycin/neomycin resistance gene
Neomycin phosphotransferase coding sequences:
Start codon (ATG): 3941-3943
Stop codon: 4733-4735
G->A mutation to remove Pst I site: 4123
C->A (Arg to Ser) mutation to remove BssH II site: 4469
Herpes simplex virus (HSV) thymidine kinase (TK) polyadenylation signal
Polyadenylation signals: 4971-4976 & 4984-4989
pUC plasmid replication origin: 5320-5963