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    Dendra2

References citing Dendra2:

  • Arrenberg AB, Del Bene F, Baier H.
    Optical control of zebrafish behavior with halorhodopsin.
    Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17968-73 doi: 10.1073/pnas.0906252106
    pmid: 19805086
     
  • Flynn KC, Pak CW, Shaw AE, Bradke F, Bamburg JR.
    Growth cone-like waves transport actin and promote axonogenesis and neurite branching.
    Dev Neurobiol. 2009 Oct;69(12):761-79 doi: 10.1002/dneu.20734
    pmid: 19513994
     
  • Wang X, Su B, Lee HG, Li X, Perry G, Smith MA, Zhu X.
    Impaired balance of mitochondrial fission and fusion in Alzheimer's disease.
    J Neurosci. 2009 Jul 15;29(28):9090-103 doi: 10.1523/JNEUROSCI.1357-09.2009
    pmid: 19605646
     
  • Falk MM, Baker SM, Gumpert AM, Segretain D, Buckheit RW 3rd.
    Gap junction turnover is achieved by the internalization of small endocytic double-membrane vesicles.
    Mol Biol Cell. 2009 Jul;20(14):3342-52 doi: 10.1091/mbc.E09-04-0288
    pmid: 19458184
     
  • Martin K, Kopperud K, Chakrabarty R, Banerjee R, Brooks R, Goodin MM.
    Transient expression in Nicotiana benthamiana fluorescent marker lines provides enhanced definition of protein localization, movement and interactions in planta.
    Plant J. 2009 Jul;59(1):150-62 doi: 10.1111/j.1365-313X.2009.03850.x
    pmid: 19309457
     
  • Korte M.
    Neuroscience. Bridging the gap and staying local.
    Science. 2009 Jun 19;324(5934):1527-8. doi: 10.1126/science.1176484
    pmid: 19541987
     
  • Wang DO, Kim SM, Zhao Y, Hwang H, Miura SK, Sossin WS, Martin KC.
    Synapse- and stimulus-specific local translation during long-term neuronal plasticity.
    Science. 2009 Jun 19;324(5934):1536-40 doi: 10.1126/science.1173205
    pmid: 19443737
     
  • Adam V, Nienhaus K, Bourgeois D, Nienhaus GU.
    Structural basis of enhanced photoconversion yield in green fluorescent protein-like protein Dendra2.
    Biochemistry. 2009 Jun 9;48(22):4905-15 doi: 10.1021/bi900383a
    pmid: 19371086
     
  • Kural C, Nonet ML, Selvin PR.
    FIONA on Caenorhabditis elegans.
    Biochemistry. 2009 Jun 9;48(22):4663-5 doi: 10.1021/bi8023477
    pmid: 19397310
     
  • Gligorijevic B, Kedrin D, Segall JE, Condeelis J, van Rheenen J.
    Dendra2 photoswitching through the Mammary Imaging Window.
    J Vis Exp. 2009 Jun 5;(28) doi: 10.3791/1278
    pmid: 19578330
     
  • Huisken J, Stainier DY.
    Selective plane illumination microscopy techniques in developmental biology.
    Development. 2009 Jun;136(12):1963-75 doi: 10.1242/dev.022426
    pmid: 19465594
     
  • Makio T, Stanton LH, Lin CC, Goldfarb DS, Weis K, Wozniak RW.
    The nucleoporins Nup170p and Nup157p are essential for nuclear pore complex assembly.
    J Cell Biol. 2009 May 4;185(3):459-73. doi: 10.1083/jcb.200810029
    pmid: 19414608
     
  • Onischenko E, Stanton LH, Madrid AS, Kieselbach T, Weis K.
    Role of the Ndc1 interaction network in yeast nuclear pore complex assembly and maintenance.
    J Cell Biol. 2009 May 4;185(3):475-91 doi: 10.1083/jcb.200810030
    pmid: 19414609
     
  • Rexach M.
    Piecing together nuclear pore complex assembly during interphase.
    J Cell Biol. 2009 May 4;185(3):377-9. doi: 10.1083/jcb.200904022
    pmid: 19414605
     
  • Samarkina ON, Popova AG, Gvozdik EY, Chkalina AV, Zvyagin IV, Rylova YV, Rudenko NV, Lusta KA, Kelmanson IV, Gorokhovatsky AY, Vinokurov LM.
    Universal and rapid method for purification of GFP-like proteins by the ethanol extraction.
    Protein Expr Purif. 2009 May;65(1):108-13 doi: 10.1016/j.pep.2008.11.008
    pmid: 19084068
  1. Constructs used: pQE30-based bacterial expression vectors encoding TagCFP, TagGFP, TagYFP, TagRFP, TurboGFP, TurboRFP, Dendra2, TurboFP602 and KillerRed.
  2. Expression system: E. coli strain M15 (pREP4).
  3. Detection system: purified recombinant FPs.
  • Cvackova Z, Masata M, Stanek D, Fidlerova H, Raska I.
    Chromatin position in human HepG2 cells: although being non-random, significantly changed in daughter cells.
    J Struct Biol. 2009 Feb;165(2):107-17 doi: 10.1016/j.jsb.2008.10.007
    pmid: 19056497
     
  • Tsutsumi R, Fukata Y, Noritake J, Iwanaga T, Perez F, Fukata M.
    Identification of G protein alpha subunit-palmitoylating enzyme.
    Mol Cell Biol. 2009 Jan;29(2):435-47 doi: 10.1128/MCB.01144-08
    pmid: 19001095
     
  • Hess ST, Gould TJ, Gunewardene M, Bewersdorf J, Mason MD.
    Ultrahigh resolution imaging of biomolecules by fluorescence photoactivation localization microscopy.
    Methods Mol Biol. 2009;544:483-522 doi: 10.1007/978-1-59745-483-4_32
    pmid: 19488720
     
  • Nakagawa T, Ishiguro S, Kimura T.
    Gateway vectors for plant transformation.
    Plant Biotechnology. 2009;26:275-84 http://www.wdc-jp.biz
     
  • Wang X, Su B, Siedlak SL, Moreira PI, Fujioka H, Wang Y, Casadesus G, Zhu X.
    Amyloid-beta overproduction causes abnormal mitochondrial dynamics via differential modulation of mitochondrial fission/fusion proteins.
    Proc Natl Acad Sci U S A. 2008 Dec 9;105(49):19318-23 doi: 10.1073/pnas.0804871105
    pmid: 19050078
     
  • Gould TJ, Gunewardene MS, Gudheti MV, Verkhusha VV, Yin SR, Gosse JA, Hess ST.
    Nanoscale imaging of molecular positions and anisotropies.
    Nat Methods. 2008 Dec;5(12):1027-30 doi: 10.1038/nmeth.1271
    pmid: 19011626
     
  • Adam V, Lelimousin M, Boehme S, Desfonds G, Nienhaus K, Field MJ, Wiedenmann J, McSweeney S, Nienhaus GU, Bourgeois D.
    Structural characterization of IrisFP, an optical highlighter undergoing multiple photo-induced transformations.
    Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18343-8 doi: 10.1073/pnas.0805949105
    pmid: 19017808
     
  • Lai KO, Zhao Y, Ch'ng TH, Martin KC.
    Importin-mediated retrograde transport of CREB2 from distal processes to the nucleus in neurons.
    Proc Natl Acad Sci U S A. 2008 Nov 4;105(44):17175-80 doi: 10.1073/pnas.0803906105
    pmid: 18957537
     
  • Baker K, Holtzman NG, Burdine RD.
    Direct and indirect roles for Nodal signaling in two axis conversions during asymmetric morphogenesis of the zebrafish heart.
    Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):13924-9 doi: 10.1073/pnas.0802159105
    pmid: 18784369
     
  • Tachibana K, Hara M, Hattori Y, Kishimoto T.
    Cyclin B-cdk1 controls pronuclear union in interphase.
    Curr Biol. 2008 Sep 9;18(17):1308-13 doi: 10.1016/j.cub.2008.07.077
    pmid: 18701285
     
  • Held MA, Boulaflous A, Brandizzi F.
    Advances in fluorescent protein-based imaging for the analysis of plant endomembranes.
    Plant Physiol. 2008 Aug;147(4):1469-81 doi: 10.1104/pp.108.120147
    pmid: 18678739
     
  • Lin MZ, Glenn JS, Tsien RY.
    A drug-controllable tag for visualizing newly synthesized proteins in cells and whole animals.
    Proc Natl Acad Sci U S A. 2008 Jun 3;105(22):7744-9. doi: 10.1073/pnas.0803060105
    pmid: 18511556
     
  • Baltrusch S, Lenzen S.
    Monitoring of glucose-regulated single insulin secretory granule movement by selective photoactivation.
    Diabetologia. 2008 Jun;51(6):989-96 doi: 10.1007/s00125-008-0979-y
    pmid: 18389213
     
  • Witze ES, Litman ES, Argast GM, Moon RT, Ahn NG.
    Wnt5a control of cell polarity and directional movement by polarized redistribution of adhesion receptors.
    Science. 2008 Apr 18;320(5874):365-9. doi: 10.1126/science.1151250
    pmid: 18420933
     
  • Hirayama S, Yamazaki Y, Kitamura A, Oda Y, Morito D, Okawa K, Kimura H, Cyr DM, Kubota H, Nagata K.
    MKKS Is a Centrosome-shuttling Protein Degraded by Disease-causing Mutations via CHIP-mediated Ubiquitination.
    Mol Biol Cell. 2008 Mar;19(3):899-911
    pmid: 18094050
     
  • Bhattacharyya S, Kulesa PM, Fraser SE.
    Vital labeling of embryonic cells using fluorescent dyes and proteins.
    Methods Cell Biol. 2008;87:187-210 doi: 10.1016/S0091-679X(08)00210-0
    pmid: 18485298
     
  • Stark DA, Kasemeier-Kulesa JC, Kulesa PM.
    Photoactivation cell labeling for cell tracing in avian development.
    CSH Protocols. 2008; pdb.prot4975
     
  • Shaner NC, Patterson GH, Davidson MW.
    Advances in fluorescent protein technology.
    J Cell Sci. 2007 Dec 15;120(Pt 24):4247-60
    pmid: 18057027
     
  • Jollivet F, Raposo G, Dimitrov A, Sougrat R, Goud B, Perez F.
    Analysis of de novo Golgi complex formation after enzyme-based inactivation.
    Mol Biol Cell. 2007 Nov;18(11):4637-47
    pmid: 17855505
     
  • Mocz G.
    Fluorescent proteins and their use in marine biosciences, biotechnology, and proteomics.
    Mar Biotechnol (NY). 2007 May-Jun;9(3):305-28
    pmid: 17372780
     
  • Morimoto A, Matsunaga S, Kurihara D, Fukui K.
    Visualization of mitotic HeLa cells by advanced polarized light microscopy.
    Micron. 2007 May 10;
    pmid: 17560789
     
  • Chudakov DM, Lukyanov S, Lukyanov KA.
    Using photoactivatable fluorescent protein Dendra2 to track protein movement.
    Biotechniques. 2007 May;42(5):553, 555, 557 passim
    pmid: 17515192
     
  • Zhang L, Gurskaya NG, Merzlyak EM, Staroverov DB, Mudrik NN, Samarkina ON, Vinokurov LM, Lukyanov S, Lukyanov KA.
    Method for real-time monitoring of protein degradation at the single cell level.
    Biotechniques. 2007 Apr;42(4):446, 448, 450
    pmid: 17489230
     
  • Chudakov DM, Lukyanov S, Lukyanov KA.
    Tracking intracellular protein movements using photoswitchable fluorescent proteins PS-CFP2 and Dendra2.
    Nat Protoc. 2007;2(8):2024-32
    pmid: 17703215
  1. Constructs used: mammalian expression vectors pPS-CFP2-C and pPS-CFP2-N and Dendra2.
  2. Expression system: HeLa cell line transiently transfected with plasmid encoding PS-CFP2 using Lipofectamine reagent (Invitrogen).
  3. Detection system: used Leica SP5 system to monitor cells 24-48 hours after transfection. Initial visualization of PS-CFP2 cyan signal was performed by scanning (400Hz) in confocal mode using 3% of 405-nm laser line intensity, emission collected at 410-500 nm. Photoswitching of PS-CFP2 was achieved by applying 30% power 405-nm laser, four scans in 'zoom to region of interest' mode (providing continuity of irradiation). Vizualization of activated PS-CFP2 green signal was performed using 4% of 488-nm laser line intensity, emission collected at 500-550 nm.
    Due to the strong emission crosstalk, the simultaneous excitation by 405-nm and 488-nm laser lines to monitor at once the initial cyan and photoactivated green forms of PS-CFP2 is inapplicable. To achieve the dual color imaging of PS-CFP2, use sequential excitation by 405-nm and 488-nm laser lines.
     
  • Wolff M, Wiedenmann J, Nienhaus GU, Valler M, Heilker R.
    Novel fluorescent proteins for high-content screening.
    Drug Discov Today. 2006 Dec;11(23-24):1054-60
    pmid: 17129823
     
  • Gurskaya NG, Verkhusha VV, Shcheglov AS, Staroverov DB, Chepurnykh TV, Fradkov AF, Lukyanov S, Lukyanov KA.
    Engineering of a monomeric green-to-red photoactivatable fluorescent protein induced by blue light.
    Nat Biotechnol. 2006 Apr;24(4):461-5
    pmid: 16550175
     

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